Genome identification and diversity analysis of banana (Musa spp.) from Jember based on morphological characters

Authors

  • Vega Kartika Sari Department of Agronomy, Faculty of Agriculture, University of Jember, Indonesia
  • Halimatus Sa'diyah Department of Agronomy, Faculty of Agriculture, University of Jember, Indonesia https://orcid.org/0000-0001-9488-8108 (unauthenticated)
  • Riza Yuli Rusdiana Department of Agronomy, Faculty of Agriculture, University of Jember, Indonesia
  • Sri Hartatik Department of Agronomy, Faculty of Agriculture, University of Jember, Indonesia
  • Kacung Hariyono Department of Agronomy, Faculty of Agriculture, University of Jember, Indonesia

DOI:

https://doi.org/10.35891/agx.v15i1.4408

Keywords:

banana, genom, identification, morphology

Abstract

Introduction: Banana plants are easy to find and grow in Indonesia, including in Jember. Banana production in Jember in 2020 increased by 50% and has the potential to be inventoried and developed. Information regarding the characteristics of various banana cultivars is needed for future banana breeding. This research was conducted to identify and classify the genome of bananas growing in Jember and determine the level of banana diversity. Methods: The banana exploration using a purposive sampling method. The observation of 15 morphological characters followed the method of Simmonds and Shepherd. Determination of the genome followed the method of Silayoi & Chamchalow and Singh & Uma. The kinship analysis uses cluster analysis using the average linkage method and Gower distance, by R Studio software. Results: There were 23 banana cultivars obtained in this research, consisting of 35% dessert bananas and 65% plantain types. Genome identification results in four genome groups, namely AA/AAA, AAB, ABB, and BB. Cluster analysis produces three main groups, where its branch is generally consistent with the genome grouping. The closest relationship is between Rayap and Seribu bananas (0.96), while the furthest is between Gaje and Agung bananas (0.38). The dissimilarity value for 23 banana cultivars is 0.36, or the similarity is 0.64. Conclusion: The 23 banana cultivars are closely related or have low diversity based on the 15 morphological characters observed. Further identification can be carried out with a greater number of morphological characters, accompanied by molecular identification.

References

Abdullah, B. J., Nasreen, R., & Ravichandran, N. (2012). A comprehensive review of consumption patterns and strategies in cosmeceutical market with a focus on dermaceuticals in Indian market. International Journal of Scientific and Research Publications, 2(2), 176–179.

Badan Pusat Statistik [BPS] Kabupaten Jember. (2021). Produksi buah–buahan dan sayuran tahunan menurut jenis tanaman, 2017–2020. https://jemberkab.bps.go.id/statictable/2021/11/08/323/produksi-buah-buahan-dan-sayuran-tahunan-menurut-jenis-tanaman-kw-2017-2020.html Diakses 14 September 2023

Fitriyah, A., Ariyanti, E. E., Damanhuri, D., & Kuswanto, K. (2017). Pengelompokan 30 kultivar pisang (Musa spp.) berdasarkan genom dan hubungan kekerabatannya. Jurnal Produksi Tanaman, 5(4).

Hariyono, K., Sari, V. K., Rusdiana, R. Y., Fariroh, I., Putri, K. W., Restanto, D. P., & Noviana, L. (2022). Inventory and morphology identification of arrowroot plants (Maranta Arundinaceus L.) in Jember regency. Jurnal Penelitian Pertanian Terapan, 22(3), 238-246. https://doi.org/10.25181/jppt.v22i3.2257

Hapsari, L., & Masrum, A. (2012). Preliminary screening resistance of Musa germplasms for banana bunchy top disease in Purwodadi Botanic Garden, Pasuruan, East Java. Buletin Kebun Raya, 15(2), 57-70.

IPGRI. (2007). Descriptor for banana (Musa spp.). International Plant Genetic Resources Institute.

Nisa, C., Badruzsaufar, & Wijaya, E. (2010). Penentuan genom fenetik kultivar pisang yang tumbuh di Kalimantan Selatan. Jurnal Zira’ah, 29(3): 188-192

Poerba, Y. S., & Ahmad, F. (2010). Genetic variability among 18 cultivars of cooking bananas and plantains by RAPD and ISSR markers. Biodiversitas Journal of Biological Diversity, 11(3), 118-123.

Rai, I. N., Mayadewi, N. N. A., Wiraatmaja, I. W., & Astiari, N. K. A. (2023). Fruit morphology and nutritional composition of different genome groups of six banana cultivars from Bali Island. Caraka Tani: Journal of Sustainable Agriculture, 38(2), 421-432. http://dx.doi.org/10.20961/carakatani.v38i2.74941

Rinaldi, R., Mansyurdin, M., & Hermanto, C. (2014). Pendugaan ploidi dan kekerabatan beberapa aksesi pisang hasil koleksi Balitbu Tropika Solok. Sainstek: Jurnal Sains dan Teknologi, 6(1), 17-23.

Rusdiana, R. Y., Sa'diyah, H., Sari, V. K., Hariyono, K., & Hartatik, S. (2023). Morphological characterization of papaya accessions in Jember through multivariate analysis. Ilmu Pertanian (Agricultural Science), 8(1), 11-20.

Sunaryo, W., & Mulyadi, A. (2019). Genome group classification and diversity analysis of talas and rutai banana, two local cultivars from East Kalimantan, based on morphological characters. Biodiversitas Journal of Biological Diversity, 20(8), 2355-2367. https://doi.org/10.13057/biodiv/d200834

Simmonds, N. W., & Shepherd, K. (1955). The taxonomy and origins of the cultivated bananas. Botanical Journal of the Linne-a Society, 55(359), 302–312. https://doi.org/10.1111/j.1095-8339.1955.tb00015.x

Szabo, K., Pamfil, D., Bădărău, A. S., & Hârţa, M. (2021). Assessment of genetic diversity and population structure of the endangered Astragalus exscapus L. subsp. transsilvanicus through DNA-based molecular markers. Plants, 10(12), 2732. https://doi.org/10.3390/plants10122732

Thomas, F. B. (2022). The role of purposive sampling technique as a tool for informal choices in a social Sciences in research methods. Just Agriculture, 2(5), 1-8.

Trimanto, T. (2012). Karakterisasi dan jarak kemiripan uwi (Dioscorea alata L.) berdasarkan penanda morfologi umbi. Buletin Kebun Raya, 15(1), 47-59.

Valmayor, R. V., Jamaluddin, S. H., Silayoi, B., Kusumo, K., Danh, L. D., Pascua, O. C., & Espino, R. R. C. (2000). Banana cultivars names and synonyms in Southeast Asia. INIBAP. France.

Wahyudi, D., & Rifliyah, K. (2020). Genome evaluation of banana cultivars based on morphological character and Inter-Simple Sequence Repeat (ISSR) molecular marker. Biodiversitas Journal of Biological Diversity, 21(7), 2982-2990.

Wahyuningtyas, W., Retnoningsih, A., & Rahayu, E. S. (2009). Genetic diversity of B genome bananas based on microsatellite marker. Biosaintifika, 1(1), 1–10.

Wijaya, A. A. (2020). Identifikasi pisang apuy sebagai kultivar unggul lokal Kabupaten Majalengka. AGROMIX, 11(1), 79-86. https://doi.org/10.35891/agx.v11i1.1907

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Published

31-03-2024

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How to Cite

Genome identification and diversity analysis of banana (Musa spp.) from Jember based on morphological characters (V. K. Sari, H. Sa'diyah, R. Y. Rusdiana, S. Hartatik, & K. Hariyono, Trans.). (2024). AGROMIX, 15(1), 44-50. https://doi.org/10.35891/agx.v15i1.4408

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